Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015799119.1_cds_XP_016463515.1_5634
CDS Infomation

[gene=LOC107786542] [db_xref=GeneID:107786542] [protein=U-box domain-containing protein 21-like] [protein_id=XP_016463515.1] [location=complement(42720..44036)] [gbkey=CDS]
Sequence

ATGATTTTTTGGAGACGTAGAAAGGACAAGGGAGCTGGAAAAAAGAAGATAACAAGATTG
AATTCTTGTAAAGAACTTACAATTCCATCTCATTTTCTTTGTCCAATTTCTCTTGATTTA
ATGAAAGATCCAGTCACATTATGTACTGGAATTTCATATGATCGTGAAAACATTGAAAAA
TGGATCGAGGCGAAGAACTCAACGTGCCCTGTAACAAATCAAGTCTTGAGAAATTATGAT
CTTATACCAAACCATACTATAAGAAAAATGATTCAAGATTGGTGTGTGGAGAATAAAAAC
TATGGTATTGAAAGAGTTCCTACTCCAAGAATTCCTATCAATTCATCTCAAGTATCGGAG
ATTTGTTCGAGGCTAATGGTTGAAACACAGAGAGGGAATGAAAAAAAATGCAGGGAATTG
GTGGGAAGAGTCAAGATTTTGGCTAAGGAAAGTGAAAGAAACAAGAAATGCATAGTAGAA
TGTGGTACAGGTAGTGTTTTTGCAACATGTTTTGAGATGTTCGCGAAGATTAGTGTAGAA
AATTGCGCGGATTTATTGAAAGATTTGTTGTCTGGATTAATATGGATGTTTCCAATTGGA
GAAGAGGGAAAATCAAAGTTAGGATCATCGATATCTTTACGTTGCATGGCATGGTTTTTG
AAAGGTGAAGATTTATCAGCAAGGCAAAATGCAGTTATAGTAATGAAAGAGTTGCTTTCT
TATGACCAAAGTTATGCAAATGATCTAACTGAAATTCAAGATTTGGCTGAATCTTTAGTC
CAAATGGTGAAAGTACCGATTTGCCCCTCGACTACGAAAGCTTCCCTAATGGTAATTTAC
TCTATGGTGTCATCTACATTGGATGAAAATAGCAACAAAGTTGTGGTCAAATTTGTCAAC
ATGGGGTTAGTTTCTTTGATTCTTGAAATTCTTGTGGATGCTGAAAAGAGTATAACAGAA
AAGGCTTTAGCAGTTTTGGACAGTATTTGCAATTTTCAAGAAGGGAAAGAAAAGGTTTAT
GACAATGGATTGACAATGCCACTAATAGTCAAGAAAATTATGAGAGTTTCACAAATGGCC
ACTGAATGTTCAATTTCAGTTTTATGGAAACTTTGCAAAGGTGGACATGAGATTTCAGTG
ATTGAGGCATTGGAATTAGGTGCTTTTCAGAAACTATTGGTGGTTTTGCAAGTTGGTTGT
GGTGAAAACACTAAGGAAAAAACTACTGAGTTATTAAAATTGATGAATATTTACAAAGAT
AGAGTGGATTGTTTTGATGGATCAACTGGTTTCAAGTATCTGAAAAGGTCATATTGA

Peptide Sequence

PEP ID

XP_016463515.1
PEP Infomation

PREDICTED: U-box domain-containing protein 21-like [Nicotiana tabacum]
Sequence

MIFWRRRKDKGAGKKKITRLNSCKELTIPSHFLCPISLDLMKDPVTLCTGISYDRENIEK
WIEAKNSTCPVTNQVLRNYDLIPNHTIRKMIQDWCVENKNYGIERVPTPRIPINSSQVSE
ICSRLMVETQRGNEKKCRELVGRVKILAKESERNKKCIVECGTGSVFATCFEMFAKISVE
NCADLLKDLLSGLIWMFPIGEEGKSKLGSSISLRCMAWFLKGEDLSARQNAVIVMKELLS
YDQSYANDLTEIQDLAESLVQMVKVPICPSTTKASLMVIYSMVSSTLDENSNKVVVKFVN
MGLVSLILEILVDAEKSITEKALAVLDSICNFQEGKEKVYDNGLTMPLIVKKIMRVSQMA
TECSISVLWKLCKGGHEISVIEALELGAFQKLLVVLQVGCGENTKEKTTELLKLMNIYKD
RVDCFDGSTGFKYLKRSY

Transcript Sequence

Gene sequence data has not been registered.